KAT6A & KAT6B

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Children with KAT6A and KAT6B share many similarities. These two genes belong to the same family of epigenetic regulators, which means they help control how other genes work.

When there’s a change in one of these genes, it can affect many parts of development. While each syndrome has its own unique traits, there’s a great deal of overlap between them.

Most children with KAT6 experience some degree of speech and motor delay, low muscle tone, and feeding or gastrointestinal challenges, particularly in early childhood. Sleep challenges and vision issues are also common. Children with KAT6B more often have distinct skeletal or joint differences, including joint contractures, limb differences, or kneecap abnormalities.

Some children with KAT6 may also experience neurological findings, such as seizures or differences in brain structure. Musculoskeletal concerns, including joint laxity, scoliosis, contractures, or muscle tightness, may become more noticeable as children grow. Despite these potential medical findings, data from the KAT6A/KAT6B Patient Registry (2025) show that the majority of parents report their children are in good overall health.

It’s important to remember that every child is unique. The specific features, and how much they affect your child, can vary widely, even among children with the same genetic change. Your child will have their own combination of strengths, challenges, and personality. Families often describe their children as social, affectionate, and wonderfully resilient.

The charts below give a detailed overview of features seen in KAT6A and KAT6B, along with notes on when they tend to appear. Your family may find it helpful to download the chart and share it with your child’s medical team to guide care and track progress.

Reported Features in KAT6 Syndrome

Very Common = observed in 50%+ of individuals

Common = observed in 25-49% of individuals

Less Common = observed in 5-24% of individuals

Rare = observed in <5% of individuals

Category
Feature
KAT6A
KAT6B
Onset
Development
Global developmental delay / intellectual disability
Very Common
Very Common
Recognized in infancy / toddler years
Speech and language disorders (limited speech, apraxia)
Very Common
Very Common
Speech delay apparent in early childhood
Hypotonia (low muscle tone)
Common
Very Common
Typically noted in infancy
Behavioral disorders (includes: autism, sensory processing, ADHD)
Common
Less Common
Observed across childhood
Motor skill delays (gross/ fine motor, movement disorder)
Common
Very Common
Evident in infancy/ toddler years and can persist
Neurology
Epilepsy / seizures
Less Common
Common
May appear in childhood
Brain structure differences (Chiari malformation, corpus callosum abnormalities, ventriculomegaly, agenesis, lissencephaly, tethered cord, delayed myelination)
Rare
Very Common
Identified on MRI, usually in childhood
Feeding & GI
Feeding difficulties (swallowing issues, tube-feeding)
Very Common
Very Common
Very evident in infancy; some require long-term tube feeding
Gastrointestinal issues (constipation, reflux)
Very Common
Very Common
Persist throughout childhood/adulthood and often requires ongoing intervention
Vision
Strabismus, cortical visual impairment (CVI), refractive errors
Very Common
Very Common
Typically recognized in infancy/early childhood
Hearing
Hearing loss (conductive and sensorineural),  perforated ear drums
Less Common
Common
Typically recognized in infancy / early childhood
Congenital / Organ
Distinctive facial features (microcephaly, dysmorphism)
Very Common
Very Common
Recognized from infancy
Congenital heart defects (Atrial Septal Defect (ASD), Ventricular Septal Defect (VSD), Patent Ductus Arteriosus (PDA), and valve anomalies)
Very Common
Very Common
Present at birth, if present
Microcephaly
Common
Common
Recognized from infancy
Kidney / urinary tract / genital anomalies (hydroenphrosis, reflux, structural anomalies)
Less Common
Very Common
Detected in infancy / childhood
Endocrine issues (thyroid, growth hormone, puberty)
Less Common
Common
Onset is variable
Musculoskeletal
Joint laxity / hypermobility
Less Common
Very Common
Seen in infancy / early childhood
Spinal differences
Less Common
Less Common
Develops later in childhood / adolescence
Abnormal patella (agenesis/hypoplasia)
Not Reported
Very Common
Seen in infancy / early childhood
Contractures / stiff joints
Not Reported
Very Common
Present at birth but may develop with age and mobility limitations
Other Health Concerns
Growth concerns (short stature, weight)
Less Common
Less Common
Usually noted in infancy / early childhood
Frequent infections (respiratory, ear)
Common
Common
Start in infancy / toddler years
Sleep issues
Common
Less Common
Often apparent in infancy and may persist
Dental abnormalities
Common
Common
Seen in infancy/early childhood
Commonality was based on data from the following sources:  1. Arboleda et al., 2015  4. Kennedy et al., 2019   5. NORD Patient Registry, 2025  6.National Organization for Rare Disorders, 2023  7. Tripathi et al., 2025  8. Yabumoto et al., 2021

Reported Features in KAT6 Syndrome

Very Common = observed in 50%+ of individuals

Common = observed in 25-49% of individuals

Less Common = observed in 5-24% of individuals

Rare = observed in <5% of individuals

Category
Feature
KAT6A
KAT6B
Onset
Development
Global developmental delay / intellectual disability
Very Common
Very Common
Recognized in infancy / toddler years
Speech and language disorders (limited speech, apraxia)
Very Common
Very Common
Speech delay apparent in early childhood
Hypotonia (low muscle tone)
Common
Very Common
Typically noted in infancy
Behavioral disorders (includes: autism, sensory processing, ADHD)
Common
Less Common
Observed across childhood
Motor skill delays (gross/ fine motor, movement disorder)
Common
Very Common
Evident in infancy/ toddler years and can persist
Neurology
Epilepsy / seizures
Less Common
Common
May appear in childhood
Brain structure differences (Chiari malformation, corpus callosum abnormalities, ventriculomegaly, agenesis, lissencephaly, tethered cord, delayed myelination)
Rare
Very Common
Identified on MRI, usually in childhood
Feeding & GI
Feeding difficulties (swallowing issues, tube-feeding)
Very Common
Very Common
Very evident in infancy; some require long-term tube feeding
Gastrointestinal issues (constipation, reflux)
Very Common
Very Common
Persist throughout childhood/adulthood and often requires ongoing intervention
Vision
Strabismus, cortical visual impairment (CVI), refractive errors
Very Common
Very Common
Typically recognized in infancy/early childhood
Hearing
Hearing loss (conductive and sensorineural),  perforated ear drums
Less Common
Common
Typically recognized in infancy / early childhood
Congenital / Organ
Distinctive facial features (microcephaly, dysmorphism)
Very Common
Very Common
Recognized from infancy
Congenital heart defects (Atrial Septal Defect (ASD), Ventricular Septal Defect (VSD), Patent Ductus Arteriosus (PDA), and valve anomalies)
Very Common
Very Common
Present at birth, if present
Microcephaly
Common
Common
Recognized from infancy
Kidney / urinary tract / genital anomalies (hydroenphrosis, reflux, structural anomalies)
Less Common
Very Common
Detected in infancy / childhood
Endocrine issues (thyroid, growth hormone, puberty)
Less Common
Common
Onset is variable
Musculoskeletal
Joint laxity / hypermobility
Less Common
Very Common
Seen in infancy / early childhood
Spinal differences
Less Common
Less Common
Develops later in childhood / adolescence
Abnormal patella (agenesis / hypoplasia)
Not Reported
Very Common
Seen in infancy / early childhood
Contractures / stiff joints
Not Reported
Very Common
Present at birth but may develop with age and mobility limitations
Other Health Concerns
Growth concerns (short stature, weight)
Less Common
Less Common
Usually noted in infancy / early childhood
Frequent infections (respiratory, ear)
Common
Common
Start in infancy / toddler years
Sleep issues
Common
Less Common
Often apparent in infancy and may persist
Dental abnormalities
Common
Common
Seen in infancy/early childhood
Commonality was based on data from the following sources:  1. Arboleda et al., 2015  4. Kennedy et al., 2019   5. NORD Patient Registry, 2025  6.National Organization for Rare Disorders, 2023  7. Tripathi et al., 2025  8. Yabumoto et al., 2021